[INFO] cloning repository https://github.com/slazicoicr/bam_histogram_qc
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/slazicoicr/bam_histogram_qc" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 76f1995e64ae232319aa05d407466f6ce0d927f0
[INFO] checking slazicoicr/bam_histogram_qc against master#cfbc6d4cf1acbac5c025acf8ed68929caa551df3 for pr-75494-beta
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc" "/workspace/builds/worker-4/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/slazicoicr/bam_histogram_qc on toolchain cfbc6d4cf1acbac5c025acf8ed68929caa551df3
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/slazicoicr/bam_histogram_qc
[INFO] finished tweaking git repo https://github.com/slazicoicr/bam_histogram_qc
[INFO] tweaked toml for git repo https://github.com/slazicoicr/bam_histogram_qc written to /workspace/builds/worker-4/source/Cargo.toml
[INFO] crate git repo https://github.com/slazicoicr/bam_histogram_qc already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded lzma-sys v0.1.14
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded fs-utils v1.1.1
[INFO] [stderr]   Downloaded rust-htslib v0.23.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 465f5e79e643453c9d769889906d826eac80ff850e053d7a2fee65f2d6903ab9
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "465f5e79e643453c9d769889906d826eac80ff850e053d7a2fee65f2d6903ab9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "465f5e79e643453c9d769889906d826eac80ff850e053d7a2fee65f2d6903ab9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "465f5e79e643453c9d769889906d826eac80ff850e053d7a2fee65f2d6903ab9", kill_on_drop: false }`
[INFO] [stdout] 465f5e79e643453c9d769889906d826eac80ff850e053d7a2fee65f2d6903ab9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 4a4fd7ecea9097a9dfc6adc8ae2b5e69d3ad0c5c9ea061270fadf179a3492727
[INFO] running `Command { std: "docker" "start" "-a" "4a4fd7ecea9097a9dfc6adc8ae2b5e69d3ad0c5c9ea061270fadf179a3492727", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.0.37
[INFO] [stderr]    Compiling memchr v2.2.0
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling cfg-if v0.1.9
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling autocfg v0.1.4
[INFO] [stderr]    Compiling pkg-config v0.3.14
[INFO] [stderr]    Compiling version_check v0.1.5
[INFO] [stderr]    Compiling lazy_static v1.3.0
[INFO] [stderr]    Compiling ucd-util v0.1.3
[INFO] [stderr]    Compiling rustc-demangle v0.1.14
[INFO] [stderr]    Compiling unicode-width v0.1.5
[INFO] [stderr]    Compiling utf8-ranges v1.0.2
[INFO] [stderr]    Compiling bitflags v1.0.4
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling vec_map v0.8.1
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling termcolor v1.0.4
[INFO] [stderr]    Compiling bindgen v0.49.2
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]     Checking matches v0.1.8
[INFO] [stderr]    Compiling ryu v0.2.8
[INFO] [stderr]     Checking either v1.5.2
[INFO] [stderr]     Checking percent-encoding v1.0.1
[INFO] [stderr]     Checking lazy_static v0.2.11
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking ansi_term v0.11.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking itoa v0.4.4
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]    Compiling clang-sys v0.28.0
[INFO] [stderr]    Compiling fs-utils v1.1.1
[INFO] [stderr]    Compiling log v0.4.6
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]    Compiling regex-syntax v0.6.6
[INFO] [stderr]     Checking unicode-bidi v0.3.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking itertools v0.8.0
[INFO] [stderr]    Compiling nom v4.2.3
[INFO] [stderr]    Compiling byteorder v1.3.1
[INFO] [stderr]    Compiling backtrace v0.3.20
[INFO] [stderr]    Compiling atty v0.2.11
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[INFO] [stderr]     Checking idna v0.1.5
[INFO] [stderr]     Checking serde_json v1.0.39
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking aho-corasick v0.7.3
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling backtrace-sys v0.1.28
[INFO] [stderr]    Compiling libloading v0.5.0
[INFO] [stderr]    Compiling lzma-sys v0.1.14
[INFO] [stderr]    Compiling libz-sys v1.0.25
[INFO] [stderr]    Compiling bzip2-sys v0.1.7
[INFO] [stderr]    Compiling quote v0.6.12
[INFO] [stderr]    Compiling syn v0.15.34
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[INFO] [stderr]    Compiling cexpr v0.3.5
[INFO] [stderr]    Compiling failure v0.1.5
[INFO] [stderr]    Compiling which v2.0.1
[INFO] [stderr]     Checking regex v1.1.6
[INFO] [stderr]    Compiling env_logger v0.6.1
[INFO] [stderr]    Compiling serde_derive v1.0.91
[INFO] [stderr]     Checking bio-types v0.5.1
[INFO] [stderr]    Compiling rust-htslib v0.23.0
[INFO] [stdout] error[E0277]: `htslib::htsFile__bindgen_ty_1` doesn't implement `std::fmt::Debug`
[INFO] [stdout]  --> /opt/rustwide/target/debug/build/rust-htslib-92300c62c0956873/out/bindings.rs:3:36720
[INFO] [stdout]   |
[INFO] [stdout] 3 | ...:: raw :: c_char , pub fp : htsFile__bindgen_ty_1 , pub format : htsFormat , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub unio...
[INFO] [stdout]   |                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `htslib::htsFile__bindgen_ty_1` cannot be formatted using `{:?}`
[INFO] [stdout]   |
[INFO] [stdout]   = help: the trait `std::fmt::Debug` is not implemented for `htslib::htsFile__bindgen_ty_1`
[INFO] [stdout]   = note: add `#[derive(Debug)]` or manually implement `std::fmt::Debug`
[INFO] [stdout]   = note: required because of the requirements on the impl of `std::fmt::Debug` for `&htslib::htsFile__bindgen_ty_1`
[INFO] [stdout]   = note: required for the cast to the object type `dyn std::fmt::Debug`
[INFO] [stdout]   = note: this error originates in a derive macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0277]: `htslib::hts_opt__bindgen_ty_1` doesn't implement `std::fmt::Debug`
[INFO] [stdout]  --> /opt/rustwide/target/debug/build/rust-htslib-92300c62c0956873/out/bindings.rs:3:46488
[INFO] [stdout]   |
[INFO] [stdout] 3 | ...: hts_fmt_option , pub val : hts_opt__bindgen_ty_1 , pub next : * mut hts_opt , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub u...
[INFO] [stdout]   |                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `htslib::hts_opt__bindgen_ty_1` cannot be formatted using `{:?}`
[INFO] [stdout]   |
[INFO] [stdout]   = help: the trait `std::fmt::Debug` is not implemented for `htslib::hts_opt__bindgen_ty_1`
[INFO] [stdout]   = note: add `#[derive(Debug)]` or manually implement `std::fmt::Debug`
[INFO] [stdout]   = note: required because of the requirements on the impl of `std::fmt::Debug` for `&htslib::hts_opt__bindgen_ty_1`
[INFO] [stdout]   = note: required for the cast to the object type `dyn std::fmt::Debug`
[INFO] [stdout]   = note: this error originates in a derive macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0277]: `htslib::__pthread_cond_s__bindgen_ty_1` doesn't implement `std::fmt::Debug`
[INFO] [stdout]  --> /opt/rustwide/target/debug/build/rust-htslib-92300c62c0956873/out/bindings.rs:3:100592
[INFO] [stdout]   |
[INFO] [stdout] 3 | ... { pub __bindgen_anon_1 : __pthread_cond_s__bindgen_ty_1 , pub __bindgen_anon_2 : __pthread_cond_s__bindgen_ty_2 , pub __g_refs : [ ::...
[INFO] [stdout]   |       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `htslib::__pthread_cond_s__bindgen_ty_1` cannot be formatted using `{:?}`
[INFO] [stdout]   |
[INFO] [stdout]   = help: the trait `std::fmt::Debug` is not implemented for `htslib::__pthread_cond_s__bindgen_ty_1`
[INFO] [stdout]   = note: add `#[derive(Debug)]` or manually implement `std::fmt::Debug`
[INFO] [stdout]   = note: required because of the requirements on the impl of `std::fmt::Debug` for `&htslib::__pthread_cond_s__bindgen_ty_1`
[INFO] [stdout]   = note: required for the cast to the object type `dyn std::fmt::Debug`
[INFO] [stdout]   = note: this error originates in a derive macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0277]: `htslib::__pthread_cond_s__bindgen_ty_2` doesn't implement `std::fmt::Debug`
[INFO] [stdout]  --> /opt/rustwide/target/debug/build/rust-htslib-92300c62c0956873/out/bindings.rs:3:100648
[INFO] [stdout]   |
[INFO] [stdout] 3 | ... , pub __bindgen_anon_2 : __pthread_cond_s__bindgen_ty_2 , pub __g_refs : [ :: std :: os :: raw :: c_uint ; 2usize ] , pub __g_size : ...
[INFO] [stdout]   |       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `htslib::__pthread_cond_s__bindgen_ty_2` cannot be formatted using `{:?}`
[INFO] [stdout]   |
[INFO] [stdout]   = help: the trait `std::fmt::Debug` is not implemented for `htslib::__pthread_cond_s__bindgen_ty_2`
[INFO] [stdout]   = note: add `#[derive(Debug)]` or manually implement `std::fmt::Debug`
[INFO] [stdout]   = note: required because of the requirements on the impl of `std::fmt::Debug` for `&htslib::__pthread_cond_s__bindgen_ty_2`
[INFO] [stdout]   = note: required for the cast to the object type `dyn std::fmt::Debug`
[INFO] [stdout]   = note: this error originates in a derive macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0277]: `htslib::__mbstate_t__bindgen_ty_1` doesn't implement `std::fmt::Debug`
[INFO] [stdout]  --> /opt/rustwide/target/debug/build/rust-htslib-92300c62c0956873/out/bindings.rs:3:144426
[INFO] [stdout]   |
[INFO] [stdout] 3 | ...w :: c_int , pub __value : __mbstate_t__bindgen_ty_1 , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union __mbstate_t__bindgen...
[INFO] [stdout]   |                 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `htslib::__mbstate_t__bindgen_ty_1` cannot be formatted using `{:?}`
[INFO] [stdout]   |
[INFO] [stdout]   = help: the trait `std::fmt::Debug` is not implemented for `htslib::__mbstate_t__bindgen_ty_1`
[INFO] [stdout]   = note: add `#[derive(Debug)]` or manually implement `std::fmt::Debug`
[INFO] [stdout]   = note: required because of the requirements on the impl of `std::fmt::Debug` for `&htslib::__mbstate_t__bindgen_ty_1`
[INFO] [stdout]   = note: required for the cast to the object type `dyn std::fmt::Debug`
[INFO] [stdout]   = note: this error originates in a derive macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0277]: `htslib::bcf_info_t__bindgen_ty_1` doesn't implement `std::fmt::Debug`
[INFO] [stdout]  --> /opt/rustwide/target/debug/build/rust-htslib-92300c62c0956873/out/bindings.rs:3:185001
[INFO] [stdout]   |
[INFO] [stdout] 3 | ... raw :: c_int , pub v1 : bcf_info_t__bindgen_ty_1 , pub vptr : * mut u8 , pub vptr_len : u32 , pub _bitfield_1 : __BindgenBitfieldUnit...
[INFO] [stdout]   |                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `htslib::bcf_info_t__bindgen_ty_1` cannot be formatted using `{:?}`
[INFO] [stdout]   |
[INFO] [stdout]   = help: the trait `std::fmt::Debug` is not implemented for `htslib::bcf_info_t__bindgen_ty_1`
[INFO] [stdout]   = note: add `#[derive(Debug)]` or manually implement `std::fmt::Debug`
[INFO] [stdout]   = note: required because of the requirements on the impl of `std::fmt::Debug` for `&htslib::bcf_info_t__bindgen_ty_1`
[INFO] [stdout]   = note: required for the cast to the object type `dyn std::fmt::Debug`
[INFO] [stdout]   = note: this error originates in a derive macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0277]: `htslib::bam_pileup_cd` doesn't implement `std::fmt::Debug`
[INFO] [stdout]  --> /opt/rustwide/target/debug/build/rust-htslib-92300c62c0956873/out/bindings.rs:3:227170
[INFO] [stdout]   |
[INFO] [stdout] 3 | ... [ u8 ; 4usize ] , u32 > , pub cd : bam_pileup_cd , } # [ test ] fn bindgen_test_layout_bam_pileup1_t ( ) { assert_eq ! ( :: std :: me...
[INFO] [stdout]   |                               ^^^^^^^^^^^^^^^^^^^^^^ `htslib::bam_pileup_cd` cannot be formatted using `{:?}`
[INFO] [stdout]   |
[INFO] [stdout]   = help: the trait `std::fmt::Debug` is not implemented for `htslib::bam_pileup_cd`
[INFO] [stdout]   = note: add `#[derive(Debug)]` or manually implement `std::fmt::Debug`
[INFO] [stdout]   = note: required because of the requirements on the impl of `std::fmt::Debug` for `&htslib::bam_pileup_cd`
[INFO] [stdout]   = note: required for the cast to the object type `dyn std::fmt::Debug`
[INFO] [stdout]   = note: this error originates in a derive macro (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 7 previous errors
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] For more information about this error, try `rustc --explain E0277`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `rust-htslib`.
[INFO] [stderr] 
[INFO] [stderr] To learn more, run the command again with --verbose.
[INFO] running `Command { std: "docker" "inspect" "4a4fd7ecea9097a9dfc6adc8ae2b5e69d3ad0c5c9ea061270fadf179a3492727", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4a4fd7ecea9097a9dfc6adc8ae2b5e69d3ad0c5c9ea061270fadf179a3492727", kill_on_drop: false }`
[INFO] [stdout] 4a4fd7ecea9097a9dfc6adc8ae2b5e69d3ad0c5c9ea061270fadf179a3492727
